Thursday 18 March 2021

EXTINCTION AND DE-EXTINCTION OF ANIMALS

 The following article was published in “RESEARCH INSIGHTS OF LIFE SCIENCE STUDENTS (Volume - 1)” by JPS Scientific Publications in 2020.

EXTINCTION AND DE-EXTINCTION OF ANIMALS

Meehir Deepak Pawar

B.Sc. Zoology, Department of Zoology, Bhavan’s College, Andheri (W), Mumbai, India

E-mail: meehirpawar@gmail.com

The word ‘Extinction’ generally refers to the process in which species of animal or plant is terminated from environment. The species is then said to be extinct. Extinction generally takes place due to Natural or Human activities. The Natural Extinction takes place because of natural phenomenon like disasters, natural selection, genetic variations, inbreeding, predation, diseases, climate change, etc. Generally, in natural extinction the main cause is that organism is not capable of adapting according to the changes in nature. But results in extinction due to human activities are much more drastic than natural extinction. Human activities like deforestation, introduction of non-native species, hunting, poaching, transmission of infection through livestock or crops, pollution after industrial revolution, overfishing, population boom, invasion, overharvesting, ocean devastation, etc. has led to extinction of many species. Five mass extinction events were caused by geologic and climatic events. Human-caused mass extinction event in Holocene epoch called as Holocene extinction or Anthropogenic Extinction. It is said that it began when the early human species started defaunation (hunting) and deforestation. Earth is undergoing early stages of Holocene Extinction and nearly 20% of all living population will be extinct in 30 yr i.e., by 2028 if conservative measures are not taken, this was the outcome of survey in 1998 by New York's American Museum of Natural History and the survey was done by 400 biologists. As per noted in IUCN Red List Of Threatened Species, 36% of 47,677 species evaluated are threatened with extinction which represent 21% of mammals, 30% of amphibians, 12% of birds, 37% of freshwater fishes, 70% of plants and 35% of invertebrates.

 Revival of extinct species or creation of organism similar to an extinct species is called as 'De-Extinction'. The outcomes and methods of de-extinction are incredible. De-extinction is also of two types; Natural and Artificial. Natural de-extinction is caused by Iterative Evolution. Iterative evolution means repetitive evolution of same structure of organism in different timeline from same ancestral lineage. Most common example of Iterative evolution is of White Throated Rail (Dryolimnas cuvieri) endemic to Madagascar thought to be extinct when Island of Aldabra disappeared under sea around 1,36,000 yr ago but was recently successful to re-colonize the Aldabra island again and became flightless like their ancestors after migrating from Madagascar. After incredible development in the biotechnology field, it is possible to revive extinct organisms depending on the condition of their fossils or preserved specimens. The artificial De-extinction is done by cloning, in vitro, reconstruction of genome, genome editing, CRISPR, back breeding, etc. The process of cloning is generally said to be most potential method for restoration of extinct species. In this process, isolation of nucleus from the preserved cell of extinct species and transferring it into enucleated egg of closely relative species and then the insertion of that egg into closely related species of the extinct animal is done. This process is only done if the preserved cell is available. In case of genome editing, the germ cell can directly be edited so that the extinct parents will produce the offspring of extinct species. This technique is used by the scientists for the species whose preserved specimens are highly degraded. Genome editing or Genome reconstruction is highly advancing nowadays so this can be a better option for De-extinction.  Back breeding is a kind of selective breeding which is used to gain the ancestral traits of the species though this is not seen much effectively in many species. Cloning of Woolly Mammoth (Mammathus primigenius) is being done by George Church and his team at Harvard. The Cloning of Pyrenean ibex (Capra pyrenaica pyrenaica) Iberian wild goat endemic to Pyrenees was experimented by Two Spanish and a French team of Scientists. Revival of Aurochs (Bos primigenius primigenius) are being attempted by matching DNA sequence of primitive cattle to that of ancient DNA sample from aurochs by Dutch-based Tauros Programme. Many attempts of de-extinction of Tasmanian Tiger (Thylacine cynocephalus) recently extinct Carnivorous marsupial endemic to Tasmania have been done and are in progress. Similarly, de-extinction of Passenger Pigeon (Ectopistes migratorius), Quagga (Equus quagga quagga), Dodo (Raphus cucullatus), Heath Hen (Tympanuchus cupido cupido), and much more experiment are going in various laboratories across the globe. Why is there any need to revive any extinct species? The answer is to conserve environment and advancement in research. Introducing the extinct species back to its environment can help the nature to revive. The ecosystem which was destroyed by human activities will be revived again. The current conservation strategies will be helped by the revived species. George Church, a Harvard geneticist, working on Cloning of Woolly Mammoth said, “A revived Woolly Mammoth can help in reversing the ill effects of global warming”. He and his team predicted that Mammoths can eat dead grass so that sunlight can reach spring grass, their weight can help to break down the thick and insulating layer of ice so that cold air can reach the soil. Thus, there will be positive effects on environment after revival of woolly Mammoth. Advantages will be majorly in each research field related to life sciences like understanding behaviour of a prehistoric or extinct animal, ethology, anatomy, physiology, morphology, developmental biology, processes occurring inside the organism, prehistoric diseases will be the major topics for research purposes. Strategies to conserve currently endangered species will become more efficient. Thus, De-Extinction of many extinct species will have positive effect in every research field of Life science and on Environment.



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Thursday 4 March 2021

INVERTEBRATES: INTRODUCTION

What are invertebrates?

The animals which lack the backbone or the vertebral column are referred to as Invertebrates. All such animals are included in a group called Invertebrata.


Also, animals are often categorized into two major groups : the chordates and the non-chordates. This categorisation or division is based on the presence or absence of the singular character the notochord. It is a stiff rod-like structure which serves as an internal skeleton.

Animals without notochord are called non-chordates and those with vertebral column are called chordates. Non-chordate and invertebrate are the terms often used for each other as synonyms but their meanings differ. For an instance, protochordates are all invertebrates because of the absence of vertebral column but they still are chordates due to presence of notochord. Thus, all the non-chordates are invertebrates whereas all invertebrates are not non-chordate.



Presently, there are about 30 invertebrate phyla which are characterized by the unity of basic structural pattern in each of them. For example, Phylum Arthropoda which includes insects, arachnids, crustaceans, etc. has an estimated 9,99,059 identified species or 85% of total identified animal species. Apart from arthropods, the invertebrates number reaches 12,38,000 or 94% excluding viruses and bacteria.

Significance of invertebrates:
Well-known biologist E. O. Wilson has described the invertebrates as, "little things which run the world". Invertebrates are a portion of nearly every food chain directly as food for fishes, amphibians, reptiles, birds, mammals or indirectly as agents in the continual recycling of nutrients in the soil. Food webs depend on these creatures executing essential procedures such as pollination or seed dispersal. We can't think of living on the earth without the existence of invertebrates.

Importance of study of invertebrates:
The study of invertebrates has acquainted us with their involvement in the significant effects on the sustainability of numerous agrarian products. Invertebrates and microorganisms play an important role in detoxifying pesticides, nurturing and enhancing the fertility, reducing the effects of pollutants and also in biological control of agricultural pests. Many invertebrates are deadly to humans as parasites (nematodes) or as vectors for serious human diseases (mites, mosquitoes).



To watch a video regarding this topic. Please visit Youtube channel of ZoologicalWisdom

https://youtu.be/pWgK01HsAkc

Wednesday 3 March 2021

DETAIL ABOUT BSc. BIOTECHNOLOGY

Choosing a career after 12th is a huge challenge. Here's the detail about a course one should opt after 12th exams.

What is BSc biotechnology

B.Sc. Biotechnology or Bachelor of Science in biotechnology is a 3 years undergraduate biotechnology course. Biotechnology is a branch of science that use biology to solve problems and make useful products. The syllabus is divided into six semesters. Here, students have to study basics topics like microbiology, Biomathematics, biochemistry, genetics, cytology, Chemistry, biostatistics, enzymes, Intellectual Property Rights, etc.

Eligibility Criteria:

The minimum eligibility for admission in BSc in Biotechnology is a Class 12th pass in Science Stream with at least 50% aggregate marks. Candidates must have studied Physics, Chemistry, and Biology in Class 12. Some Institutes or Universities may conduct entrance exams for the same.

Who should opt?
Those who are interested and are curious about biological sciences on molecular & genetic level and wants to explore more in this field.
Those who have good problem-solving skills and are proficient with computer and also have the ability to work both independently and as part of a team.
Those who have good analytical data handling and written communication skills and can conduct detailed work precisely with an the ability to plan research, analyze and interpret data, report writing and practical skills.
Those who want to go for further studies or research.
Those who are interested in laboratory research.

What after BSc Biotechnology?
One can pursue post-graduation (M.Sc.) in Biotechnology after doing undergraduation.
Biotechnology has wide range of courses thus giving opportunities to specialize/research into many of them like food technology, biomedical and industrial,  biotechnology, epidemiology, marine biology, forensic science, bioinformatics, enzymology, etc.
The most prominent area of biotechnology is the production of therapeutic proteins and other drugs through genetic engineering.
One can also appear for UPSC or state-level public commission exam or civil service examination.
One can also pursue MBA in biotechnology management and MBA in Pharmaceuticals

Job opportunities after BSc Zoology
One can apply for Biotechnology engineer, Biotech analysts, Lab technician, Project manager, research assistant, Teacher, Microbiologists, Epidemiologists, biostatistician, bioproduction, Operators, biomanufacturing specialists, etc. in Research firms, Hospitals, Waste management sectors, Pharmaceuticals, Food production firms, Clinical research firms, Laboratories, etc

People sometimes misinterpret bsc biotechnology as BTech biotechnology. One must understand that they are not comparable. BSc in Biotechnology deals with basic and applied aspects of all fields of biotechnology, especially human health. It is a baseline for MSc that may culminate in a PhD. Whereas, BTech course deals mostly with the engineering and applied aspects of the field.

POPULATION GENETICS: INTRODUCTION

Population genetics: It is a branch of genetics that studies the distribution or changes in the frequency of allele and genetic variation in or between populations leading to Evolution.

Population: Generally, the population is defined as a group of organisms of the same species inhabiting a specific area at a given time.
The new definition of the population is, "the population is an ultimate self-reproducing grouping of specific individuals which occupies a definite area over an evolutionary long period to form an independent genetic system and an ecological niche of its own".

Gene pool: It is the sum of the genetic material of a population at a given time. This term is typically used in relation to a population made up of individuals of the same species and includes all genes and combinations of genes (sum of the alleles) in the population.

Allele frequency: It is the measure of how much an allele is frequent in a population.
It is calculated by the number of particular alleles divided by the total number of alleles present in the given population

Phenotype frequency: A ratio stating the number of times a specific phenotype occurs in a population in a single generation. It is calculated by the number of a particular phenotype divided by the total number of individuals in that population.

Genotypes frequency: Genotype frequency in a population is the number of individuals with a given genotype divided by the total number of individuals in the population. It is calculated by the number of a particular genotype divided by the total number of individuals in that population.


Microevolution: "The change in allele frequency over a period of time in a particular population is defined as Microevolution". This change is due to four different processes: mutation, selection (natural and artificial), gene flow and genetic drift. This change happens over a relatively short (in evolutionary terms) amount of time compared to the changes termed macroevolution. The mathematical structure for the study of the process of microevolution is studied through population genetics. Pesticide resistance, herbicide resistance, and antibiotic resistance are all examples of microevolution by natural selection. 

HARDY-WEINBERG LAW

Hardy-Weinberg law was discovered independently in 1908 by Wilhelm Weinberg, a German physician, and Godfrey Harold Hardy, a British mathematician.


The Hardy-Weinberg law states that,

"In a large, random-mating population, the genotype and allele frequencies remain constant in the absence of any evolutionary influences from one to another generation."


The conditions to maintain the Hardy-Weinberg equilibrium are: no mutation, no gene flow, large population size, random mating, and no natural selection. Because all of these disruptive forces commonly occur in nature, the Hardy-Weinberg equilibrium rarely applies in reality.


The Hardy-Weinberg formulas allow scientists to determine genetic equilibrium or whether evolution has occurred in a population. 

Two formulas must be memorized:

p2 + 2pq + q2 = 1 and p + q = 1

p = frequency of the dominant allele in the population

q = frequency of the recessive allele in the population

p2 = percentage of homozygous dominant individuals

q2 = percentage of homozygous recessive individuals

2pq = percentage of heterozygous individuals



Some of the major factors which affect the genetic equilibrium and induce the variability in a population are as follows: (A) Mutations (B) Recombinations during Sexual Reproduction (C) Genetic Drift (D) Gene Migration (Gene Flow) (E) Natural Selection.

This Will be explained in detail in upcoming posts


Applications:

Medical geneticists can use the Hardy-Weinberg law to calculate the probability of human matings that may result in defective offspring. The law is also useful in determining whether the number of harmful mutations in a population is increasing as a result of radiation from industrial processes, medical techniques, and fallout.


DETAILS ABOUT BSc ZOOLOGY

Choosing a career after 12th is a huge challenge. Here's the detail about a course one should opt after 12th exams.

What is BSc Zoology?

B.Sc. Zoology or Bachelor of Science in Zoology is a 3 years undergraduate Zoology course. Zoology is one of the most popular branches of Science that involves the study of animals and their biological processes. The syllabus is divided into six semesters. Here, students have to study basics topics like animal anatomy, physiology, biochemistry, genetics, evolution, social and ecological behaviour, conservation, classification, etc. Eligibility Criteria: The minimum eligibility for admission in BSc in Zoology is Class 12 pass in Science Stream with at least 50% aggregate marks. Candidates must have studied Physics, Chemistry, and Biology in Class 12. Some Institutes or Universities may conduct entrance exams for the same. Who should opt? Those who are interested and are curious about animal kingdom and wants to explore more in this field. Those who want to go for further studies or research. Those who have project management & presentation skills and also the ability to work both independently and as part of a team. Those who have good analytical, data handling and written communication skills and can conduct detailed work precisely with an the ability to plan research, analyze and interpret data and write reports and practical skills. Those who can conduct on-field as well as laboratory research What after BSc Zoology? Zoology graduates can opt for PhD in Zoology after completing their post-graduation. Zoology is itself divided into many branches thus given opportunities to specialize/research into many of its branches like herpetology (the study of reptiles), ornithology (the study of birds), mammalogy (the study of mammals), marine biology, Biomedical science, Ecology and evolutionary biology, Animal behavior and neurobiology, etc One can also appear for UPSC or state-level public commission exam or civil service examination. The students can also pursue higher education in mass communication and build a career in the media industry. There is a constant need for zoologists for research and documentaries. They can prepare themselves to get jobs in the National Geographic Channel, Animal Planet, Discovery, or any other such channels. Job opportunities after BSc Zoology One can apply for Zoology Faculty Member, Clinical Business Associate, Online Tutor, biology teacher for lower classes (for teaching sectors, a B. Ed exam is mandatory), Research Associate, Nutrition Specialist, Medical Representative. Other job titles include zookeeper, animal caretaker, veterinary technologist and technician, environmental consultant, technical writer, and research and laboratory technician. But, due to the increase in competition nowadays job opportunities are less as compared to those after Post-graduation therefore one must at least complete post-graduation before applying for any job.

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